List of publications AME

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Total found: 662 records
Hager K., Luo Z.-H., Montserrat-Diez M., Ponce-Toledo R.I., Baur P., Dahlke S., Andrei A.S., Bulzu P., Ghai R., Urich T., Glatzel S., Schleper C., Rodrigues-Oliveira T. (2025) Diversity and environmental distribution of Asgard archaea in shallow saline sediments. Frontiers in Microbiology 16: 1549128.
DOI: 10.3389/fmicb.2025.1549128
Hejzlar J., Potužák J., Míček M., Jarošík J., Paule-Mercado M., Znachor P., Porcal P. (2025) Vliv způsobu vypouštění z nádrže Římov za povodně v září 2024 na následnou jakost vodárenského odběru. [The influence of the type of discharge from the Římov reservoir during the flood in September 2024 on the subsequent quality of the water withdrawal.] Sborník konference Vodní nádrže 41–48.
Johansen J., Jusko B.M., Pietrasiak N., Alwathnani H., Soliman N., Zhydan A., Peron S., Luknis M., Osorio-Santos K., Řeháková K., Zhang B., Hasenstab-Lehman K.E., Hoyer W.F., Pal S., Singh P. (2025) Revision and expansion of the genus Spirirestis (Tolypothrichaceae, Cyanobacteria). Journal of Phycology 61: 966–988.
DOI: 10.1111/jpy.70059
Khan S., Wdówka K., Calkiewicz J., Rychert K., Nawrocka L., Ameryk A., Shabarova T., Mukherjee I., Šimek K., Jakubowska A., Zalewski M., Piwosz K. (2025) High-temporal resolution of microbial food web dynamics and structure during phytoplankton blooms in the Baltic Sea Environmental Microbiology 27: e70190.
DOI: 10.1111/1462-2920.70190
Kiss É., Moos M., Mareš J., Opekar S., Tomanová L., Anindita P.D., Lukeš M., Urajová P., Sobotka R. (2025) Cyanophycinase is required for heterotrophy in cyanobacteria. Journal of Biological Chemistry 301: 110791.
DOI: 10.1016/j.jbc.2025.110791
Kozlíková E., Urajová P., Mareš J. (2025) Phylogenetic heterogeneity within the Cuspidothrix clade (Nostocales, Cyanobacteria): Dolichospermum longicellulare as a black sheep of its genus. Phycologia 64: 346–354.
DOI: 10.1080/00318884.2025.2545165
Lanta V., Adámek M., Chlumská Z., Pánková K., Kopecký M., Macek M. , Růžičková A., Busse A., Vébrová D., Ruka A.T., Řeháková K., Holá A., Čížek L., Doležal J., Sucháčková Bartoňová A. (2025) Plant colonisation, soil nutrient patterns and microclimate after a large forest fire in temperate Central Europe. Forest Ecology and Management 585: article number: 122643.
DOI: 10.1016/j.foreco.2025.122643
Moravcová A., Barbi F., Algora C., Tosadori G., Macek P., Albrechtová J., Baldrian P., Kohout P. (2025) Contrasting stability of fungal and bacterial communities during long‑term decomposition of fungal necromass in Arctic tundra. Environmental Microbiome 20: 75.
DOI: 10.1186/s40793-025-00730-5
Mukherjee I., Bulzu P., Boukheloua R., Asghar U., Park H., Henriques Vieira H., Chiriac M., Kasalický V., Znachor P., Rychtecký P., Salcher M., Šimek K., Haber M., Ghai R. (2025) Cultivation, genomics, and giant viruses of a ubiquitous and heterotrophic freshwater cryptomonad. The ISME Journal 19: wraf271.
DOI: 10.1093/ismejo/wraf271
Pärtel M., Riin T., Carmona C., Riibak K., Moora M., Bennett J., Chiarucci A., Chytrý M., de Bello F., Eriksson O., Harrison S., Lewis R., Moles A.T., Öpik M., Price J.N. ..., Macek P., ... Zobel M. (2025) Global impoverishment of natural vegetation revealed by dark diversity. Nature 640: 917-924.
DOI: 10.1038/s41586-025-08814-5
Pires de Paula C., Bárta J., Borovec J., Frouz J., Rychtecký P., Sirová D. (2025) qPCR‐based quantification reveals high plant host‐specificity of endophytic colonization levels in leaves. American Journal of Botany 112: e16448.
DOI: 10.1002/ajb2.16448
Salcher M., Layoun P., Fernandes C., Chiriac M., Bulzu P., Ghai R., Shabarova T., Lanta V., Callieri C., Sonntag B., Posch T., Lepori F. , Znachor P., Haber M. (2025) Bringing the uncultivated microbial majority of freshwater ecosystems into culture. Nature Communications 16: 7971.
DOI: 10.1038/s41467-025-63266-9
Schreiber J., Pouska V., Macek P., Thom D., Bässler C. (2025) Effects of canopy-mediated microclimate and object characteristics on deadwood temperature. Agricultural and Forest Meteorology 362: 110378.
DOI: 10.1016/j.agrformet.2024.110378
Šetlíková I., Mikšovská V., Let M., Hlaváč D., Puhanová V., Bláha M., Kajgrová L., Vrba J., Veselý L. (2025) Response of aquatic invertebrate communities to different management strategies in central European fishponds. Environmental Sciences Europe 37: 162.
DOI: 10.1186/s12302-025-01190-x
Šimek K., Asghar U., Sonntag B., Kasalický V., Shabarova T., Mukherjee I. (2025) New lineage of scuticociliates dominates the ciliate community and bacterivory in hypolimnetic waters of a freshwater reservoir.. The ISME Journal 19: wraf148.
DOI: 10.1093/ismejo/wraf148
Tran-Khac V., Doubek J.P., Patil V., Stockwell J., Adrian R., Chang C.W., Dur G., Lewandowska A., Rusak J., Salmaso N., Straile D., Thackeray S., Venail P., Bhattacharya R., Brentrup J., Bruel R., Feuchtmayr H., Gessner M.O., Grossart H., Ibelings B.W., Jacquet S., MacIntyre S., Matsuzaki S.I.S., Nodine E., Nõges P., Rudstam L., Soulignac F., Verburg P., Znachor P., Zohary T. , Anneville O. (2025) Using long-term ecological datasets to unravel the impacts of short-term meteorological disturbances on phytoplankton communities. Freshwater Biology 70: e70023.
DOI: 10.1111/fwb.70023
Vondrášková A., Hauer T., Mareš J., Berrendero-Gomez E., Zima J., Montoya-Terreros H., Villanueva C.D., Johansen J. (2025) Molecular characterization of the type species of Kyrtuthrix (Rivulariaceae, Cyanobacteriota) with comparison to Nunduva: Morphologically different but molecularly cryptic genera. Journal of Phycology 61: 1274–1287.
DOI: 10.1111/jpy.70063
Znachor P., Kosour D., Rederer L., Koza V., Kolář V., Nedoma J. (2025) Tracking reservoir warming in a changing climate: A 31-year study from Czechia. Environmental Science and Ecotechnology 28: 100631.
DOI: 10.1016/j.ese.2025.100631
Azzella M.M., Vecchia A.D., Abeli T., Alahuhta J., Amoroso V.B., Ballesteros E., Bertrin V., Brunton D., Bobrov A.A., Caldeira C., Ceschin S., Chemeris E.V., Čtvrtlíková M., de Winton M. et.al. (2024) Global assessment of aquatic Isoëtes species ecology. Freshwater Biology 69: 1420–1437.
DOI: 10.1111/fwb.14316
Blabolil P., Draštík V., Holubová M., Hůda J., Jůza T., Muška M., Vrba J. (2024) Ichtyofauna v tocích historicky zasažených acidifikací pod Černým, Čertovým, Plešným a Prášilským jezerem. [Ichthyofauna in the streams historically impacted by acidification below the Černé, Čertovo, Plešné and Prášilské lakes.] Silva Gabreta 30: 121-140.
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