List of publications AME

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Total found: 693 records
Paule-Mercado M., Jarošík J., Nedoma J., Rychtecký P., Seďa J., Znachor P., Hejzlar J. (2026) Modelling of phytoplankton–zooplankton dynamics under environmental change in a temperate dimictic reservoir. Ecological Modelling 522: 111856.
DOI: 10.1016/j.ecolmodel.2026.111856
Pham K., McGrail R.K., Moe L.A., Pearce R., McCulley R.L. (2026) Substitution of fiber hemp for corn did not affect soil greenhouse gas emissions from a Kentucky cropping system. Agrosystems, Geosciences & Environment 9: e70407.
DOI: 10.1002/agg2.70407
Pires de Paula C., Macek P., Varsadiya M., Borovec J., Balkan M.A., Younginger B.S., Ballhorn D.J., Pîcek T., Hájek T., Frouz J., Bárta J., Sirová D. (2026) Ecological drift and host filtering jointly structure foliar endophytes during ecosystem development. Environmental Microbiome 21: 83.
DOI: 10.1186/s40793-026-00906-7
Prins V., Tedersoo L., Mikryukov V., Paiste P., Sepp M., Grossart H., Kisand V., Laas A., Tammert H., Abarenkov K., Agan A., Agasild H., Agha A. ..., Rychtecký P., Znachor P. (2026) The FunAqua dataset of global fungal biodiversity in aquatic ecosystems. Scientific Data 13: 1346.
DOI: 10.1038/s41597-026-07729-8
Rabaey J.S., Lewis A.S.L., Attermeyer K., Aurich P., Bansal S., Bartosiewicz M., Bertolet B.L., Bussmann I. , Cadieux S.B., Calamita E., Capelli C., Carey C.C., Cillero C., Clayer F., D’Ambrosio S.L., Davidson T.A., Deemer B.R., Denfeld B.A., Eckert W., Esposito C., Ford P., Gorsky A., Griffiths N.A., Grossart H., Hamilton D.P., Holgerson M.A., Huser B.J., Iwata T., Jansen J., Jones S.E., Juutinen S., Kortelainen P., Koschorreck M., Kragh T., Laas A., Larmola T., Läubli S., Laurion I., Lehmann M.F., Liu L., Martikainen P.J., Matoušů A., McCord S.A., Montes-Pérez J.J., Nizzoli D., Ordóñez C., Peacock M., Pilla R.M., Prėskienis V., Pu J., Riis T., Saarela T., Santoso A.B., Schubert C.J., Sepulveda-Jauregui A., Sherman B.S., Sø J.S., Stenehjem K.J., Strock K.E.D., Tsuchiya K., Wendt-Potthoff K., Weyhenmeyer G., Znachor P., Zopfi J. (2026) Depth-resolved carbon dioxide and methane concentrations in 522 lakes, ponds, and reservoirs worldwide. Scientific Data 13: 483.
DOI: 10.1038/s41597-026-06751-0
Ruka A.T., Schweichhart J., Doležal J., Čapková K., Chlumská Z., Calvillo-Medina R., Meador Travis B., Praeg N., Illmer P., Angel R., Řeháková K. (2026) Year-round rhythms: Alpine plant species modulate soil and microbial dynamics during the growing season and under the snow. Ecological Monographs 96: e70055.
DOI: 10.1002/ecm.70055
Ruka A.T., Schweichhart J., Doležal J., Čapková K., Chlumská Z., Calvillo-Medina R., Meador Travis B., Praeg N., Illmer P., Angel R., Řeháková K. (2026) Year-round rhythms: Alpine plant species modulate soil and microbial dynamics during the growing season and under the snow Ecological Monographs 96: article number e70055.
DOI: 10.1002/ecm.70055
Sahoo G., Urajová P., Irungbam J.S., Gayathri M., Şahin Karagöz Y., Singh D., Znachor P., Rychtecký P., Seďa J., Devetter M., Knappe H.C., Selander E., Ghai R., Saurav K. (2026) Diversity and biological activity of freshwater copepodamides during a spring bloom in the Římov reservoir. ISME Communications 6: ycag166.
DOI: 10.1093/ismeco/ycag166
Schweichhart J., Pires de Paula C., Kreidlová V., Vrba J., Šorf M., Sirová D. (2026) Fungi associated with freshwater zooplankton are taxon-specific, temporally dynamic and reflect allochthonous inputs. Molecular Ecology 35: e70436.
DOI: 10.1111/mec.70436
Singh A., Bulzu P., Lanta V., Chaloupský P., Salcher M., Shabarova T. (2026) From soils to lake: interplay between hydrology and local environmental settings drives species selection across a karst landscape. Frontiers in Microbiology 17: 1813326.
DOI: 10.3389/fmicb.2026.1813326
Singh A., Dongre S., Sharma S., Joshi K., Bagdare B., Bobade R., Prakash O., Sharma R. (2026) Decolourizing distillery spent wash using fungal biotechnologies: from pollution to potential. Bioresources and Bioprocessing 13: 42.
DOI: 10.1186/s40643-026-01021-8
Šorf M., Veselá J., Regenda J., Všetičková L., Nedoma J., Pechar L., Vrba J. (2026) Zooplankton density and Daphnia fecundity in hypereutrophic fishponds: response to fish stock pressure or nourishing food availability? Inland Waters 16: 2646670.
DOI: 10.1080/20442041.2026.2646670
Spohn M., Arnillas C.A., Bakker J.D., Borer E.T. , Bråthen K.A., Cadotte M.W., Carbutt C., Catford J.A., DuPre M.E., Eisenhauer N., Estrada C., Hagenah N., Haider S., Harms K.E., Hautier Y., Hersch-Green E.I., Knops J.M.H., Laanisto L., Laungani R., Macek P., Martinson H., Millett J., Pärtel M., Pennings S.C., Peri P.L., Power S.A., Risch A.C., Roscher C., Seabloom E.W., Smith N.G., Stevens C., Virtanen R., Wardle G.M., Zhang P. (2026) Intense solar radiation constrains plant species richness in global grasslands. Proceedings of the National Academy of Sciences 123: e2527128123.
DOI: 10.1073/pnas.2527128123
Stoyneva‑Gärtner M., Grossart H., Frenken T., Schmeller D.S., Garzoli L., Rasconi S., Wilk‑Woźniak E., Reñé A., Cerbin S., Lepère C., Pires de Paula C., Loyau A., Kudeń A., Gavrilović A., Lønborg C., Walusiak E., Kagalou I., Trbojevic I., Jug‑Dujaković J., Ivanov K., Morales L., Erez M.S., Balode M., Zrimec M.B., Budziak M., Stupar M., Androv M., Znachor P., Marchese P., Chinaglia S., Zlatković S., Sime‑Ngando T., Ramshaj Q., Krztoń W., Uzunov B. (2026) Drivers of aquatic zoosporic parasites in natural and artificial environments. Aquatic Sciences 88: 57.
DOI: 10.1007/s00027-026-01287-2
Strunecký O., Zapomělová E., Jezberová J., Morais J., Toledo Lemus M., Štenclová L., Johansen J., Čapková K., Vasconcelos V.M.O., Mareš J. (2026) To multicellularity and back again: Description of two new coccoid genera (Portococcus gen. nov. and Pseudanabaenococcus gen. nov.) in the basal “filamentous” order Pseudanabaenales, Cyanobacteria. Journal of Phycology 62: 234–255.
DOI: 10.1111/jpy.70130
Vrba J., Kajgrová L., Bláha M., Mráz J., Roy K. (2026) Proměny rybničních ekosystémů během minulého století aneb Co jsme to s těmi rybníky provedli? [A century of transformation of the fishpond ecosystems: What have we really done?] Vodní hospodářství 76: 1-4.
Yahdjian L., Campana S., Tognetti P.M., Alberti J., Graff P., Molina C., Borer E.T. , Seabloom E.W., Prober S.M., MacDougall A.S., Risch A.C., Price J., Power S.A., Barrio I.C., Hersch-Green E., Fay P.A., Bagchi S., Bakker J.D., Blumenthal D. ..., Macek P. (2026) Insights on global rangeland ecosystem services shaped by grazing and fertilization Frontiers in Ecology and the Environment 24: e70022.
DOI: 10.1002/fee.70022
Znachor P., Rychtecký P., Pires de Paula C. (2026) From zooplankton surface scums to an unusual brown bloom: observations of a fungal‑like phenomenon in a temperate reservoir. Aquatic Ecology 60: 125.
DOI: 10.1007/s10452-026-10367-2
Asghar U., Mukherjee I., Sonntag B., Pires de Paula C., Kasalický V., Bulzu P., Singh A., Shabarova T., Piwosz K., Šimek K. (2025) Morphological and molecular analyses of season-specific responses of freshwater ciliate communities to top-down and bottom-up experimental manipulations. mSystems 10: e00304-25.
DOI: 10.1128/msystems.00304-25
Barrio I.C., Vuorinen K.E.M., Barbero-Palacios L., Defourneaux M., Petit Bon M., Greer E.A., Anderson H.B., Horstkotte T., Lecomte N., Windirsch T. ...., Macek P. (2025) Emerging priorities in terrestrial herbivory research in the Arctic. Arctic Science 11: 1-26.
DOI: 10.1139/as-2024-0080
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