List of publications AME

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Total found: 668 records
Šimek K., Asghar U., Sonntag B., Kasalický V., Shabarova T., Mukherjee I. (2025) New lineage of scuticociliates dominates the ciliate community and bacterivory in hypolimnetic waters of a freshwater reservoir.. The ISME Journal 19: wraf148.
DOI: 10.1093/ismejo/wraf148
Tran-Khac V., Doubek J.P., Patil V., Stockwell J., Adrian R., Chang C.W., Dur G., Lewandowska A., Rusak J., Salmaso N., Straile D., Thackeray S., Venail P., Bhattacharya R., Brentrup J., Bruel R., Feuchtmayr H., Gessner M.O., Grossart H., Ibelings B.W., Jacquet S., MacIntyre S., Matsuzaki S.I.S., Nodine E., Nõges P., Rudstam L., Soulignac F., Verburg P., Znachor P., Zohary T. , Anneville O. (2025) Using long-term ecological datasets to unravel the impacts of short-term meteorological disturbances on phytoplankton communities. Freshwater Biology 70: e70023.
DOI: 10.1111/fwb.70023
Vondrášková A., Hauer T., Mareš J., Berrendero-Gomez E., Zima J., Montoya-Terreros H., Villanueva C.D., Johansen J. (2025) Molecular characterization of the type species of Kyrtuthrix (Rivulariaceae, Cyanobacteriota) with comparison to Nunduva: Morphologically different but molecularly cryptic genera. Journal of Phycology 61: 1274–1287.
DOI: 10.1111/jpy.70063
Znachor P., Kosour D., Rederer L., Koza V., Kolář V., Nedoma J. (2025) Tracking reservoir warming in a changing climate: A 31-year study from Czechia. Environmental Science and Ecotechnology 28: 100631.
DOI: 10.1016/j.ese.2025.100631
Azzella M.M., Vecchia A.D., Abeli T., Alahuhta J., Amoroso V.B., Ballesteros E., Bertrin V., Brunton D., Bobrov A.A., Caldeira C., Ceschin S., Chemeris E.V., Čtvrtlíková M., de Winton M. et.al. (2024) Global assessment of aquatic Isoëtes species ecology. Freshwater Biology 69: 1420–1437.
DOI: 10.1111/fwb.14316
Blabolil P., Draštík V., Holubová M., Hůda J., Jůza T., Muška M., Vrba J. (2024) Ichtyofauna v tocích historicky zasažených acidifikací pod Černým, Čertovým, Plešným a Prášilským jezerem. [Ichthyofauna in the streams historically impacted by acidification below the Černé, Čertovo, Plešné and Prášilské lakes.] Silva Gabreta 30: 121-140.
Blabolil P., Draštík V., Hůda J., Muška M., Jůza T., Peterka J., Vrba J., Kopáček J. (2024) Brown trout natural colonisation as a sign of full lake recovery from acidification. Water Air and Soil Pollution 235: 723.
DOI: 10.1007/s11270-024-07537-z
Bohunická M. , Johansen J., Villanueva C.D., Mareš J., Štenclová L., Becerra–Absalón I., Hauer T., Kaštovský J. (2024) Revision of the pantropical genus Brasilonema (Nostocales, Cyanobacteria), with the description of 24 species new to science. Fottea 24: 137–184.
DOI: 10.5507/fot.2024.002
Boukheloua R., Mukherjee I., Park H., Šimek K., Kasalický V., Ngochera M., Grossart H., Picazo-Mozo A., Camacho A. , Cabello-Yeves P.J., Rodriguez-Valera F. , Callieri C., Andrei A.S., Pernthaler J., Posch T., Alfreider A., Sommaruga R., Hahn M., Sonntag B., López-García P., Moreira D., Jardillier L., Lepère C., Biderre-Petit C., Bednarska A., Ślusarczyk M., Tóth V.R., Banciu H.L., Kormas K., Orlić S., Śantić D., Muyzer G., Herlemann D.P.R., Tammert H., Bertilsson S., Langenheder S., Zechmeister T. , Salmaso N., Storelli N., Capelli C., Lepori F. , Lanta V., Henriques Vieira H., Kostanjšek F., Kabeláčová K., Chiriac M., Haber M., Shabarova T., Rychtecký P., Fernandes C., Znachor P., Szöke-Nagy T., Layoun P., Wong H., Kavagutti V., Bulzu P., Salcher M., Piwosz K., Ghai R. (2024) Global freshwater distribution of Telonemia protists. The ISME Journal 18: wrae177.
DOI: 10.1093/ismejo/wrae177
Gazo I., Dey A., Franěk R., Güralp H.K., Lebeda I., Flajšhans M., Pšenička M. (2024) Inhibition of Atm and Atr kinases affects embryo development and the DNA damage response in sterlet (Acipenser ruthenus). Aquaculture 590: 741146.
DOI: 10.1016/j.aquaculture.2024.741146
Henriques Vieira H., Bulzu P., Kasalický V., Haber M., Znachor P., Piwosz K., Ghai R. (2024) Isolation of a widespread giant virus implicated in cryptophyte bloom collapse. The ISME Journal 18: wrae029.
DOI: 10.1093/ismejo/wrae029
Jílková V., Macek P., Angst G., Bartuška M., Starý J., Šustr V., Devetter M. (2024) Macrofauna amplify plant litter decomposition and stabilization in arctic soils in a warming climate. Soil Biology and Biochemistry 188 : 109245.
DOI: 10.1016/j.soilbio.2023.109245
Jůza T., Blabolil P., Čech M., Draštík V., Holubová M., Kočvara L., Kubečka J., Malinovskyi O., Policar T., Rychtecký P., Říha M., Sajdlová Z., Tušer M., Vašek M. (2024) Assessing the efficacy of spring stocking of pikeperch (Sander lucioperca) into a eutrophic reservoir. Lake and Reservoir Management 40: 196-204.
DOI: 10.1080/10402381.2024.2333298
Kajgrová L., Kolář V., Roy K., Adámek Z., Blabolil P., Kopp R., Mráz J., Musil M., Pechar L., Potužák J., Vrba J. (2024) A stoichiometric insight into the seasonal imbalance of phosphorus and nitrogen in central European fishponds. Environmental Sciences Europe 36: 139.
DOI: 10.1186/s12302-024-00968-9
Layoun P., López-Pérez M., Haro-Moreno J.M., Haber M., Thrash J.C., Henson M.W., Kavagutti V., Ghai R., Salcher M. (2024) Flexible genomic island conservation across freshwater and marine Methylophilaceae. The ISME Journal 18: wrad036.
DOI: 10.1093/ismejo/wrad036
MacDougall A.S., Esch E., Chen Q., Carroll O., Bonner C., Ohlert T., Siewert M., Sulik J., Schweiger A., Borer E.T. , Naidu D. ..., Macek P. (2024) Widening global variability in grassland biomass since the 1980s. Nature Ecology & Evolution 8: 1877–1888.
DOI: 10.1038/s41559-024-02500-x
Macek M., Vrba J., Hejzlar J., Řeháková K., Jarošík J., Šorf M., Šimek K. (2024) Two-decade changes in the ciliate assemblage feeding pattern reflect the reservoir nutrient load. Diversity 16: 534.
DOI: 10.3390/d16090534
Masuda T., Mareš J., Shiozaki T., Inomura K., Fujiwara A., Prášil O. (2024) Crocosphaera watsonii – A widespread nitrogen-fixing unicellular marine cyanobacterium. Journal of Phycology 60: 604–620.
DOI: 10.1111/jpy.13450
Mennicken S., Pires de Paula C., Vogt-Schilb H., Jersáková J. (2024) Diversity of mycorrhizal fungi in temperate orchid species: Comparison of culture-dependent and culture-independent methods. Journal of Fungi 10: 92.
DOI: 10.3390/jof10020092
Mukherjee I., Grujčić V., Salcher M., Znachor P., Seďa J., Devetter M., Rychtecký P., Šimek K., Shabarova T. (2024) Integrating depth-dependent protist dynamics and microbial interactions in spring succession of a freshwater reservoir. Environmental Microbiome 19: 31.
DOI: 10.1186/s40793-024-00574-5
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