List of publications AME

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Total found: 617 records
Villena-Alemany C., Mujakic I., Fecskeová L.K., Woodhouse J., Auladell A., Dean J., Hanusová M., Socha M., Gazulla C.R., Sunagawa S., Kavagutti V., Andrei A.S., Grossart H., Ghai R., Koblížek M., Piwosz K. (2024) Phenology and ecological role of aerobic anoxygenic phototrophs in freshwaters. Microbiome 12: 65.
DOI: 10.1186/s40168-024-01786-0
Vrba J., Šorf M., Nedoma J., Benedová Z., Kröpfelová L., Šulcová J., Tesařová B., Musil M., Pechar L., Potužák J., Regenda J., Šimek K., Řeháková K. (2024) Top‑down and bottom‑up control of plankton structure and dynamics in hypertrophic fishponds. Hydrobiologia 851: 1095–1111.
DOI: 10.1007/s10750-023-05312-5
Wong H., Bulzu P., Ghai R., Chiriac M., Salcher M. (2024) Ubiquitous genome streamlined Acidobacteriota in freshwater environments. ISME Communications 4: ycae124.
DOI: 10.1093/ismeco/ycae124
Bar-Shalom R., Rozenberg A., Lahyani M., Hassanzadeh B., Sahoo G., Haber M., Burgsdorf I., Tang X., Squatrito V., Gómez-Consarnau L., Béjà O., Steindler L. (2023) Rhodopsin-mediated nutrient uptake by cultivated photoheterotrophic Verrucomicrobiota. ISME 17 : 1063–1073.
DOI: 10.1038/s41396-023-01412-1
Bešta T., Mareš J., Čapková K., Janeček E., Štenclová L., Kust A., Říha M., Konopáčová E., Řeháková K. (2023) Littoral periphyton dynamics in newly established post‑mining lakes. Aquatic Sciences 85: 21 .
DOI: 10.1007/s00027-022-00914-y
Bogdan D.F., Baricz A.I., Chiciudean I., Bulzu P., Cristea A., Năstase-Bucur R., Levei E.A., Cadar O., Sitar C., Banciu H.L., Moldovan O.T. (2023) Diversity, distribution and organic substrates preferences of microbial communities of a low anthropic activity cave in North-Western Romania. Frontiers in Microbiology 14: 962452.
DOI: 10.3389/fmicb.2023.962452
Briddon C.L., Miclăuş M., Hegedüs A., Chiriac M., Nicoară M., Drugă B. (2023) Long-term exposure to elevated temperature leads to altered gene expression in a common bloom-forming cyanobacterium. Limnology and Oceanography 68: 2654–2667.
DOI: 10.1002/lno.12448
Chiriac M., Haber M., Salcher M. (2023) Adaptive genetic traits in pelagic freshwater microbes. Environmental Microbiology 25: 606–641.
DOI: 10.1111/1462-2920.16313
Čtvrtlíková M., Kopáček J., Nedoma J., Znachor P., Hekera P., Vrba J. (2023) Aquatic quillworts, Isoëtes echinospora and I. lacustris under acidic stress—A review from a temperate refuge. Ecology and Evolution 13: e9878.
DOI: 10.1002/ece3.9878
Fraser M.W., Martin B.C., Wong H., Burns B.P., Kendrick G.A. (2023) Sulfide intrusion in a habitat forming seagrass can be predicted from relative abundance of sulfur cycling genes in sediments. Science of the Total Environment 864: 161144.
DOI: 10.1016/j.scitotenv.2022.161144
García Criado M., Myers‐Smith I.H., Bjorkman A.D., Normand S., Blach-Overgaard A., Thomas H.J.D., Eskelinen A., Happonen K. ..., Macek P. (2023) Plant traits poorly predict winner and loser shrub species in a warming tundra biome. Nature Communications 14: 3837.
DOI: 10.1038/s41467-023-39573-4
Haidau C., Bulzu P., Mirea I.C., Bucur R., Moldovan O.T. (2023) Potential environmental drivers of fossil bones degradation—a metabarcoding approach in two Carpathian caves. Geomicrobiology Journal 40: 654–666.
DOI: 10.1080/01490451.2023.2227625
Hiiesalu I., Schweichhart J., Angel R., Davison J., Doležal J., Kopecký M., Macek M. , Řeháková K. (2023) Plant-symbiotic fungal diversity tracks variation in vegetation and the abiotic environment along an extended elevational gradient in the Himalayas FEMS Microbiology Ecology 99: Article number fiad092.
DOI: 10.1093/femsec/fiad092
Hollister R.D., Elphinstone C., Henry G.H.R., Bjorkman A.D., Klanderud K., Björk R.G., Björkman M.P., Bokhorst S., Carbognani M. ...., Macek P. (2023) A review of open top chamber (OTC) performance across the ITEX Network. Arctic Science 9: 331–344.
DOI: 10.1139/AS-2022-0030
Jehlička J., Culka A., Němečková K., Mareš J. (2023) Using Raman spectroscopy to detect scytonemin of epiliths and endoliths from marble, serpentinite and gypsum. Journal of Raman Spectroscopy 54: 1280–1296.
DOI: 10.1002/jrs.6514
Kavagutti V., Bulzu P., Chiriac M., Salcher M., Mukherjee I., Shabarova T., Grujčić V., Mehrshad M., Kasalický V., Andrei A.S., Jezberová J., Seďa J., Rychtecký P., Znachor P., Šimek K., Ghai R. (2023) High‑resolution metagenomic reconstruction of the freshwater spring bloom. Microbiome 11: 15.
DOI: 10.1186/s40168-022-01451-4
Kavagutti V., Chiriac M., Ghai R., Salcher M., Haber M. (2023) Isolation of phages infecting the abundant freshwater Actinobacteriota order ‘Ca. Nanopelagicales’. The ISME Journal 17: 943–946.
DOI: 10.1038/s41396-023-01400-5
Kišidayová S., Scholcová N., Mihaliková K., Váradyová Z., Pristaš P., Weisskopf Stanislava, Chrudimský T., Chroňáková A., Šimek M., Šustr V. (2023) Some aspects of the physiology of the Nyctotherus velox, a commensal ciliated protozoon taken from the hindgut of the tropical millipede Archispirostreptus gigas Life 13: Article number 1110.
DOI: 10.3390/ life13051110
Konopáčová E., Schagerl M., Bešta T., Čapková K., Pouzar M., Štenclová L., Řeháková K. (2023) An assessment of periphyton mats using CHEMTAX and traditional methods to evaluate the seasonal dynamic in post-mining lakes. Hydrobiologia 850: 3143-3160.
DOI: 10.1007/s10750-023-05243-1
Masuda T., Inomura K., Mareš J., Kodama T., Shiozaki T., Matsui T., Suzuki K., Takeda S., Deutsch C., Prášil O., Furuya K. (2023) Coexistence of dominant marine phytoplankton sustained by nutrient specialization. Microbiology Spectrum 11: 1-14.
DOI: 10.1128/spectrum.04000-22
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