List of publications AME

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Total found: 591 records
Flores-Uribe J., Hevroni G. , Ghai R., Pushkarev A. , Inoue K. , Kandori H. , Béjà O. (2019) Heliorhodopsins are absent in diderm (Gram-negative) bacteria: Some thoughts and possible implications for activity Environmental Microbiology Reports 11: 419-424.
DOI: 10.1111/1758-2229.12730
Fonseca R.M.P., Pires de Paula C., Bichuette M.E., Chagas A. (2019) First record of Amphoromorpha/Basidiobolus fungus on centipedes (Geophilomorpha, Geophilidae) from Brazilian caves Subterranean Biology 32: 61-67 .
DOI: 10.3897/subtbiol.32.38310
Francová K., Šumberová K., Kučerová A., Čtvrtlíková M., Šorf M., Borovec J., Drozd B., Janauer G.A., Vrba J. (2019) Macrophyte assemblages in fishponds under different fish farming management Aquatic Botany 159: 103131.
DOI: 10.1016/j.aquabot.2019.103131
Gabaldon Tebar C., Devetter M., Hejzlar J., Šimek K., Znachor P., Nedoma J., Seďa J. (2019) Seasonal strengths of the abiotic and biotic drivers of a zooplankton community Freshwater Biology 64: 1326–1341.
DOI: 10.1111/fwb.13308
Kavagutti V., Andrei A., Mehrshad M., Salcher M., Ghai R. (2019) Phage-centric ecological interactions in aquatic ecosystems revealed through ultradeep metagenomics Microbiome 7: 135.
DOI: 10.1186/s40168-019-0752-0
Kolesár Fecskeová L., Piwosz K., Hanusová M., Nedoma J., Znachor P., Koblížek M. (2019) Diel changes and diversity of pufM expression in freshwater communities of anoxygenic phototrophic bacteria Scientific Reports 9: 18766 .
DOI: 10.1038/s41598-01
Kopáček J., Kaňa J., Porcal P., Vrba J., Norton S. (2019) Effects of tree dieback on lake water acidity in the unmanaged catchment of Plešné Lake, Czech Republic Limnology and Oceanography 64: 1614-1626.
DOI: 10.1002/lno.11139
Mareš J., Hájek J., Urajová P., Kust A., Jokela J., Saurav K., Galica T., Čapková K., Mattila A., Haapaniemi E., Permi P. , Mysterud I. , Skulberg O. M, Karlsen J., Fewer D. P. , Sivonen K., Tonnesen H. H. , Hrouzek P. (2019) Alternative Biosynthetic Starter Units Enhance the Structural Diversity of Cyanobacterial Lipopeptides Applied and Environmental Microbiology 85: e02675-18.
DOI: 10.1128/AEM.02675-18
Mareš J., Johansen J., Hauer T., Zima J., Ventura S., Cuzman O., Tiribilli B., Kaštovský J. (2019) Taxonomic resolution of the genus Cyanothece (Chroococcales, Cyanobacteria), with a treatment on Gloeothece and three new genera, Crocosphaera, Rippkaea, and Zehria Journal of Phycology 55: 578-610.
DOI: 10.1111/jpy.12853
Mareš J., Strunecký O., Bučinská L., Wiedermannová J. (2019) Evolutionary Patterns of Thylakoid Architecture in Cyanobacteria Frontiers in Microbiology 10: 277.
DOI: 10.3389/fmicb.2019.00277
Matoušů A., Rulík M., Tušer M., Bednařík A., Šimek K., Bussmann I. (2019) Methane dynamics in a large river: a case study of the Elbe River Aquatic Sciences 81: UNSP 12.
DOI: 10.1007/s00027-018-0609-9
Pazderník M., Mareš J., Pilný J., Sobotka R. (2019) The antenna-like domain of the cyanobacterial ferrochelatase can bind chlorophyll and carotenoids in an energy-dissipative configuration Journal of Biological Chemistry 294: 11131-11143.
DOI: 10.1074/jbc.RA119.008434
Perivolioti T. M., Tušer M., Frouzová J., Znachor P., Rychtecký P., Mouratidis A., Terzopoulos D., Bobori D. (2019) Estimating environmental preferences of freshwater pelagic fish using hydroacoustics and satellite remote sensing Water 11: 2226.
DOI: 10.3390/w11112226
Řeháková K., Čapková K., Hrouzek P., Koblížek M., Doležal J. (2019) Microbial photosynthetic and photoprotective pigments in Himalayan soils originating from different elevations and successional stages Soil Biology & Biochemistry 132: 153-164.
DOI: 10.1016/j.soilbio.2019.02.008
Salcher M., Schaefle D., Kaspar M., Neuenschwander S., Ghai R. (2019) Evolution in action: habitat transition from sediment to the pelagial leads to genome streamlining in Methylophilaceae ISME Journal 13: 2764–2777.
DOI: 10.1038/s41396-019-0471-3
Saurav K., Macho M. , Kust A., Delawská K., Hájek J., Hrouzek P. (2019) Antimicrobial activity and bioactive profiling of heterocytous cyanobacterial strains using MS/MS-based molecular networking Folia Microbiologica 64: 645–654 .
DOI: 10.1007/s12223-019-00737-9
Šimek K., Grujčić V., Nedoma J., Jezberová J., Šorf M., Matoušů A., Pechar L., Posch T., Bruni E.P., Vrba J. (2019) Microbial food webs in hypertrophic fishponds: Omnivorous ciliate taxa are major protistan bacterivores Limnology and Oceanography 64: 2295–2309.
DOI: 10.1002/lno.11260
Šimek K., Sirová D. (2019) Fluorescently Labeled Bacteria as a Tracer to Reveal Novel Pathways of Organic Carbon Flow in Aquatic Ecosystems Jove - Journal of Visualized Experiments 151: e59903.
DOI: 10.3791/59903
Tichá A., Bešta T., Vondrák D., Houfková P., Jankovská V. (2019) Nutrient availability affected shallow-lake ecosystem response along the Late-Glacial/Holocene transition Hydrobiologia 846: 87-108.
DOI: 10.1007/s10750-019-04054-7
Vavourakis C.D. , Mehrshad M., Balkema C., van Hall R., Andrei A., Ghai R., Sorokin D., Muyzer G. (2019) Metagenomes and metatranscriptomes shed new light on the microbial-mediated sulfur cycle in a Siberian soda lake BMC Biology 17: 69.
DOI: 10.1186/s12915-019-0688-7
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