Publications

Total found: 21 records
Grujčić V., Nuy J. K., Salcher M., Shabarova T., Kasalický V., Boenigk J., Jensen M. , Šimek K. (2018) Cryptophyta as major bacterivores in freshwater summer plankton ISME Journal 12: 1668-1681.
DOI: 10.1038/s41396-018-0057-5
Kasalický V., Zeng Y. H. , Piwosz K., Šimek K., Kratochvilová H., Koblížek M. (2018) Aerobic Anoxygenic Photosynthesis Is Commonly Present within the Genus Limnohabitans Applied and Environmental Microbiology 84: e02116-17.
DOI: 10.1128/AEM.02116-17
Nguyen N.H.A., Špánek R., Kasalický V., Ribas D., Vlková D., Řeháková H., Kejzlar P., Ševců A. (2018) Different effects of nano-scale and micro-scale zero-valent iron particles on planktonic microorganisms from natural reservoir water Environmental Science: Nano 5: 1117.
DOI: 10.1039/c7en01120b
Šimek K., Grujčić V., Hahn M., Horňák K., Jezberová J., Kasalický V., Nedoma J., Salcher M., Shabarova T. (2018) Bacterial prey food characteristics modulate community growth response of freshwater bacterivorous flagellates Limnology and Oceanography 63: 484–502.
DOI: 10.1002/lno.10759
Horňák K., Kasalický V., Šimek K., Grossart H. (2017) Strain-specific consumption and transformation of alga-derived dissolved organic matter by members of the Limnohabitans-C and Polynucleobacter-B clusters of Betaproteobacteria Environmental Microbiology 19: 4519–4535 .
DOI: 10.1111/1462-2920.13900
Jezberová J., Jezbera J., Znachor P., Nedoma J., Kasalický V., Šimek K. (2017) The Limnohabitans genus harbors generalistic and opportunistic subtypes: evidence from spatiotemporal succession in a canyon-shaped reservoir Applied and Environmental Microbiology 83: e01530-17.
DOI: 10.1128/AEM.01530-17
Shabarova T., Kasalický V., Šimek K., Nedoma J., Znachor P., Posch T., Pernthaler J., Salcher M. (2017) Distribution and ecological preferences of the freshwater lineage LimA (genus Limnohabitans) revealed by a new double hybridization approach Environmental Microbiology 19: 1296–1309 .
DOI: 10.1111/1462-2920.13663
Peerakietkhajorn S., Kato Y. , Kasalický V., Matsuura T., Watanabe H. (2016) Betaproteobacteria Limnohabitans strains increase fecundity in the crustacean Daphnia magna: symbiotic relationship between major bacterioplankton and zooplankton in freshwater ecosystem. Environmental Microbiology 18: 2366–2374..
DOI: 10.1111/1462-2920.12919
Salcher M., Ewert C., Šimek K., Kasalický V., Posch T. (2016) Interspecific competition and protistan grazing affect the coexistence of freshwater betaproteobacterial strains. FEMS Microbiology Ecology 92: -.
DOI: 10.1093/femsec/fiv156
Grujčić V., Kasalický V., Šimek K. (2015) Prey-specific growth responses of freshwater flagellate communities induced by morphologicallly distinct bacteria from the genus Limnohabitans. Applied and Environmental Microbiology 81: 4993–5002 .
DOI: 10.1128/AEM.00396-15
Šimek K., Nedoma J., Znachor P., Kasalický V., Jezbera J., Horňák K., Seďa J. (2014) A finely tuned symphony of factors modulates the microbial food web of a freshwater reservoir in spring. Limnology and Oceanography 59: 1477–1492..
Jezbera J., Jezberová J., Kasalický V., Šimek K., Hahn M. (2013) Patterns of Limnohabitans microdiversity across a large set of freshwater habitats as revealed by reverse line blot hybridization. PLOS ONE 8: e58527..
DOI: DOI: 10.1371/journal.pone.0058527
Kasalický V., Jezbera J., Hahn M., Šimek K. (2013) The diversity of the Limnohabitans genus, an important group of freshwater bacterioplankton, by characterization of 35 isolated strains. PLOS ONE 8: e58209..
Šimek K., Kasalický V., Jezbera J., Horňák K., Nedoma J., Hahn M., Bass D., Jost S., Boenigk J. (2013) Differential freshwater flagellate community response to bacterial food quality with a focus on Limnohabitans bacteria. ISME Journal 7: 1519–1530..
Kasalický V., Jezbera J., Hahn M., Jezberová J., Hejzlar J., Šimek K. (2012) Ecology of planktonic freshwater bacteria of the Limnohabitans genus (Betaproteobacteria). In: Zborník príspevkov XVI. Konferencia SLS a ČLS Od molekúl po ekosystémy, Jasná, June 25–29, 2012, ISBN 978–80–971056–0–0: pp. 59–62.
Straškrábová V., Kasalický V., Šmilauer P., Kopylov A. (2012) Složení mikrobiálního společenstva pelagiálu v komplexním systému Bílého jezera, řeky Šeksny a Rabinské nádrže na horní Volze; význam abiotických a biologických factorů na rozlišení lokalit s využitím ordinační analýzy [Composition of pelagic microbial as In: Zborník príspevkov XVI. Konferencia SLS a ČLS Od molekúl po ekosystémy, Jasná, June 25–29, 2012, ISBN 978–80–971056–0–0: pp. 154–156.
Zeng Y., Kasalický V., Šimek K., Koblížek M. (2012) Genome sequences of two freshwater betaproteobacterial isolates, Limnohabitans species strains Rim28 and Rim47, indicate their capabilities as both photoautotrophs and ammonia oxidizers. Journal of Bacteriology 194: 6302-6303..
Šimek K., Kasalický V., Zapomělová E., Horňák K. (2011) Alga-derived substrates select for distinct Betaproteobacterial lineages and contribute to niche separation in Limnohabitans strains. Applied and Environmental Microbiology 77: 7307-7315..
Hahn M., Kasalický V., Jezbera J., Brandt U., Jezberová J., Šimek K. (2010) Limnohabitans curvus gen. nov. sp. nov., a planktonic bacterium isolated from freshwater lake. International Journal of Systematic and Evolutionary Microbiology 60: 1358–1365..
DOI: DOI: 10.1099/ijs.0.013292-0
Hahn M., Kasalický V., Jezbera J., Brandt U., Šimek K. (2010) Limnohabitans australis sp. nov. isolated from a freshwater pond and emended description of the genus Limnohabitans. International Journal of Systematic and Evolutionary Microbiology 60: 2946–2950..

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Biology Centre CAS
Institute of Hydrobiology
Na Sádkách 702/7
370 05 České Budějovice

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